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  5. Msp_g48763

Msp_g48763 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48763
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Adi_g010912 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19006 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29210 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16770 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26368 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene22844.t1 Aspi01Gene22844 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61596.t2 CRR22, Aspi01Gene61596 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g012008 EMB2758 not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023827 No alias not classified & original description: CDS=1-3255 0.03 OrthoFinder output from all 47 species
Azfi_s0057.g034255 No alias not classified & original description: CDS=1-2025 0.04 OrthoFinder output from all 47 species
Azfi_s0069.g036583 No alias not classified & original description: CDS=1-1518 0.03 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.14G013800.1 Ceric.14G013800 not classified & original description: pacid=50633719... 0.04 OrthoFinder output from all 47 species
Ceric.22G072200.1 Ceric.22G072200 not classified & original description: pacid=50614353... 0.03 OrthoFinder output from all 47 species
Dac_g01356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08179 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18152 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18257 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g18428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19095 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g20281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21033 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27646 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27713 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30284 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42745 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44991 LOI1, MEF11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45949 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11455 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05785 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07665 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.03 OrthoFinder output from all 47 species
GSVIVT01012206001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01033735001 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Len_g00981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17732 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24653 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g30844 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50232 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07380 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_65500g0010 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01673 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57507 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63395 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63808 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63860 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63892 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017928 No alias not classified & original description: CDS=112-2919 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022672 No alias not classified & original description: CDS=1-3558 0.03 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo110422 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Smo86032 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05566 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 191 266
IPR046848 E_motif 93 150
IPR002885 Pentatricopeptide_repeat 11 37
IPR002885 Pentatricopeptide_repeat 41 72
No external refs found!