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  5. Ala_g01356

Ala_g01356


Description : MYB-RELATED transcription factor *(MYB-R-R) & original description: none


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01356

Target Alias Description ECC score Gene Family Method Actions
AT1G70000 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT1G74840 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g004593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012577 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Adi_g075106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30623 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g06263 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g49186 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aob_g16613 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aob_g22310 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene72883.t1 Aspi01Gene72883 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cre03.g198800 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dac_g03644 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08051 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08181 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014754001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01034001001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64360.1 LOC_Os01g64360 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Len_g13453 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Len_g31113 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Len_g41469 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
MA_11322g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
MA_40234g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
MA_41803g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_908g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Msp_g15603 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Msp_g35415 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ore_g21324 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Pir_g51414 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g08536 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Smo130556 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc04g008870.3.1 Solyc04g008870 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Spa_g25374 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Spa_g37626 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e027835_P005 Zm00001e027835 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 60 105
No external refs found!