Aliases : APE1
Description : photosynthetic acclimation APE acclimation factor & original description: none
Gene families : OG0005042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g01434 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G38660 | APE1 | acclimation of photosynthesis to environment | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g042602 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g05820 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04161 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g11675 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g00474 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene37157.t1 | APE1, Aspi01Gene37157 | photosynthetic acclimation APE acclimation factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36758 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.36G020000.1 | APE1, Ceric.36G020000 | photosynthetic acclimation APE acclimation factor &... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000241.155 | APE1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g665250 | APE1 | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g08395 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15090 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.11 | OrthoFinder output from all 47 species | |
| Dde_g12570 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07374 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01036442001 | APE1 | Photosynthesis.photophosphorylation.photosystem... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_11215 | APE1 | photosynthetic acclimation APE acclimation factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g27010.1 | APE1, LOC_Os08g27010 | photosynthetic acclimation APE acclimation factor | 0.06 | OrthoFinder output from all 47 species | |
| Len_g00377 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g00668 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.12 | OrthoFinder output from all 47 species | |
| Mp1g12820.1 | APE1 | photosynthetic acclimation APE acclimation factor | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g00353 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g30376 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g17711 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g12433 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g59760 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.09 | OrthoFinder output from all 47 species | |
| Pnu_g12820 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c4_3720V3.1 | APE1, Pp3c4_3720 | acclimation of photosynthesis to environment | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32168 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0071.g016876 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16456 | No alias | photosynthetic acclimation APE acclimation factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Smo117112 | APE1 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g034170.4.1 | APE1, Solyc03g034170 | photosynthetic acclimation APE acclimation factor | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g11785 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g12102 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e004293_P003 | APE1, Zm00001e004293 | photosynthetic acclimation APE acclimation factor | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0034311 | diol metabolic process | IEP | HCCA |
| BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021275 | DUF2854 | 116 | 266 |
| No external refs found! |
