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  5. Ala_g01538

Ala_g01538 (OBP3)


Aliases : OBP3

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01538

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00038440 HCA2, DOF5.6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Aob_g18876 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.01 OrthoFinder output from all 47 species
Ceric.09G055200.1 TMO6, Ceric.09G055200 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G032900.1 TMO6, Ceric.22G032900 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g31456 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29870 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_74014g0010 No alias transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Pir_g26266 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29072 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19399 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61765 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49274 CDF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23610 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 14 69
No external refs found!