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  5. Ala_g02187

Ala_g02187 (PUB8, B80)


Aliases : PUB8, B80

Description : E3 ubiquitin ligase *(PUB8) & original description: none


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02187
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT3G02840 No alias ARM repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G19380 PUB25 plant U-box 25 0.05 OrthoFinder output from all 47 species
AT3G52450 PUB22 plant U-box 22 0.02 OrthoFinder output from all 47 species
AT5G37490 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.06 OrthoFinder output from all 47 species
Adi_g003285 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077175 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01116 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18167 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21197 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38062 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06990 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20026 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10929 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12714 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12715 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23185 CMPG1, ATCMPG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23643 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30969 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35657 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37093 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40105 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60936 PUB25 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61569 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12417 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15330 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16033 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04412 PUB23 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04774 PUB25 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18761 PUB29, ATPUB29 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g39282 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07828.t1 PUB26, Aspi01Gene07828 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12032.t1 PUB25, Aspi01Gene12032 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15171.t1 PUB29, ATPUB29,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18444.t1 PUB23, Aspi01Gene18444 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene18451.t1 PUB25, Aspi01Gene18451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18452.t1 PUB25, Aspi01Gene18452 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18453.t1 PUB25, Aspi01Gene18453 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18467.t1 PUB23, Aspi01Gene18467 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19337.t1 PUB26, Aspi01Gene19337 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19337.t2 PUB26, Aspi01Gene19337 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene19342.t1 PUB26, Aspi01Gene19342 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19350.t1 PUB26, Aspi01Gene19350 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25347.t1 PUB26, Aspi01Gene25347 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27391.t1 PUB26, Aspi01Gene27391 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33499.t1 PUB25, Aspi01Gene33499 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43215.t1 PUB24, Aspi01Gene43215 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44311.t1 PUB22, Aspi01Gene44311 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44314.t1 PUB23, Aspi01Gene44314 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44315.t1 PUB23, Aspi01Gene44315 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44316.t1 PUB23, Aspi01Gene44316 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44317.t1 PUB23, Aspi01Gene44317 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44318.t1 PUB23, Aspi01Gene44318 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44321.t1 PUB23, Aspi01Gene44321 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44809.t1 PUB25, Aspi01Gene44809 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51624.t1 PUB15, Aspi01Gene51624 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55033.t1 PUB25, Aspi01Gene55033 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G007700.1 PUB23, Ceric.10G007700 not classified & original description: pacid=50612519... 0.03 OrthoFinder output from all 47 species
Ceric.19G059800.1 PUB26, Ceric.19G059800 not classified & original description: pacid=50575490... 0.03 OrthoFinder output from all 47 species
Dac_g10662 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29374 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01521 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07421 PUB23 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g31575 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46168 PUB23 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g10795 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11880 CMPG1, ATCMPG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16036 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011139001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011140001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011616001 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_02633 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_11650 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_19502 PUB23 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_33334 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g33680.1 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g34410.1 PUB25, LOC_Os02g34410 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g50460.1 LOC_Os02g50460 U-box domain-containing protein 20 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g13740.1 LOC_Os03g13740 U-box domain-containing protein 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g34140.1 PUB29, ATPUB29,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g13870.1 LOC_Os06g13870 U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os10g03440.1 LOC_Os10g03440 U-box domain-containing protein 20 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06410.1 PUB24, LOC_Os12g06410 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01810 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31416 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432813g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10433846g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_1663g0020 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_33190g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_52661g0010 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_684442g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_83739g0020 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_84154g0010 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8837995g0010 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_95662g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_95662g0020 PUB25 U-box domain-containing protein 27 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp7g11000.1 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g11020.1 PUB25 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Msp_g25038 PUB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38744 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09512 PUB29, ATPUB29 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g37574 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03662 CMPG2, ATCMPG2 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21647 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29206 PUB25 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33878 PUB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36530 PUB23 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42463 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12470 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19356 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_16470V3.1 ATPUB17, PUB17,... RING/U-box superfamily protein with ARM repeat domain 0.01 OrthoFinder output from all 47 species
Ppi_g18199 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011093 PUB23 not classified & original description: CDS=1-1278 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023196 PUB26 not classified & original description: CDS=1-1080 0.05 OrthoFinder output from all 47 species
Solyc01g007000.4.1 PUB22, Solyc01g007000 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g007010.2.1 PUB22, Solyc01g007010 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g007020.4.1 PUB23, Solyc01g007020 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc01g007030.3.1 PUB22, Solyc01g007030 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g007040.4.1 PUB22, Solyc01g007040 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc01g007050.3.1 PUB24, Solyc01g007050 E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g107980.3.1 PUB26, Solyc01g107980 U-box domain-containing protein 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g008100.3.1 Solyc04g008100 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g071030.1.1 Solyc04g071030 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Solyc11g068920.1.1 PUB23, Solyc11g068920 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc11g068940.1.1 PUB24, Solyc11g068940 E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e000999_P001 Zm00001e000999 U-box domain-containing protein 20 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e008167_P001 PUB23, Zm00001e008167 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014752_P001 PUB23, Zm00001e014752 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014766_P001 CMPG2, ATCMPG2,... E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Zm00001e015763_P001 Zm00001e015763 U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e022679_P001 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e036030_P001 Zm00001e036030 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038657_P001 Zm00001e038657 U-box domain-containing protein 75 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e041397_P001 PUB23, Zm00001e041397 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 305 343
IPR003613 Ubox_domain 6 75
No external refs found!