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  5. Ala_g02236

Ala_g02236 (CPN60B, LEN1)


Aliases : CPN60B, LEN1

Description : chaperone *(Hsp60) & original description: none


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260480 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.08 OrthoFinder output from all 47 species
AMTR_s00062p00185880 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00119930 CPN60B, LEN1,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.06 OrthoFinder output from all 47 species
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.02 OrthoFinder output from all 47 species
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.02 OrthoFinder output from all 47 species
Adi_g058751 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09354 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26318 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08982 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28064.t1 CPN60B, LEN1,... chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000356 No alias chaperone *(Hsp60) & original description: CDS=314-2140 0.03 OrthoFinder output from all 47 species
Azfi_s0217.g058536 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=281-2059 0.03 OrthoFinder output from all 47 species
Cba_g03270 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03962 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13701 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 OrthoFinder output from all 47 species
Cre04.g231222 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Cre17.g741450 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Dac_g15356 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07618 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08062 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26759 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08451 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
GSVIVT01031526001 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
LOC_Os06g02380.2 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
LOC_Os12g17910.1 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Len_g13340 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28437 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436772g0010 CH-CPN60A, CPN60A, SLP chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
MA_587689g0010 CH-CPN60A, CPN60A, SLP RuBisCO large subunit-binding protein subunit alpha... 0.05 OrthoFinder output from all 47 species
Msp_g06450 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11382 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03062 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08643 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15384 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10336 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09116 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g31540 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_4660V3.1 CPN60B, LEN1, Pp3c16_4660 chaperonin 60 beta 0.02 OrthoFinder output from all 47 species
Pp3c24_12180V3.1 CH-CPN60A,... chaperonin-60alpha 0.03 OrthoFinder output from all 47 species
Ppi_g14667 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g40159 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56884 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016064 No alias chaperone *(Hsp60) & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024885 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=136-1980 0.04 OrthoFinder output from all 47 species
Sam_g12248 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39492 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Smo168153 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Solyc01g028810.3.1 Solyc01g028810 subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Solyc03g120850.4.1 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Solyc05g010240.4.1 Solyc05g010240 subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Spa_g09931 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001025_P002 Zm00001e001025 subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e029825_P001 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e031536_P001 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 91 594
No external refs found!