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  5. Ala_g02268

Ala_g02268


Description : not classified & original description: none


Gene families : OG0003840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00165880 evm_27.TU.AmTr_v1... Protein transport protein Sec24-like At3g07100... 0.03 OrthoFinder output from all 47 species
Aev_g02527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.85 No alias Protein transport protein Sec24-like At3g07100... 0.02 OrthoFinder output from all 47 species
Cre09.g392503 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g23056 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01036116001 No alias Protein transport protein Sec24-like At3g07100... 0.05 OrthoFinder output from all 47 species
Gb_21909 No alias Protein transport protein Sec24-like At3g07100... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33690.1 LOC_Os04g33690 Protein transport protein Sec24-like At3g07100... 0.03 OrthoFinder output from all 47 species
Lfl_g34066 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g04931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c26_15780V3.1 Pp3c26_15780 sec23/sec24 transport family protein 0.01 OrthoFinder output from all 47 species
Smo440407 No alias Protein transport protein Sec24-like At3g07100... 0.06 OrthoFinder output from all 47 species
Solyc11g068500.2.1 Solyc11g068500 Protein transport protein Sec24-like At3g07100... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 503 614
IPR006896 Sec23/24_trunk_dom 126 378
No external refs found!