Ala_g02288


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00156450 REME1,... Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
AT2G41080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g069152 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10827 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g23930 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g27555 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001067 EMB2758 not classified & original description: CDS=1-1968 0.06 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.05 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.05 OrthoFinder output from all 47 species
Ceric.30G007900.1 Ceric.30G007900 not classified & original description: pacid=50608292... 0.02 OrthoFinder output from all 47 species
Ceric.32G042700.1 Ceric.32G042700 not classified & original description: pacid=50598057... 0.05 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17091 CRR22 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_17962 No alias RNA editing factor (SEL1/PDM1) 0.04 OrthoFinder output from all 47 species
Gb_28390 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
LOC_Os09g24680.1 LOC_Os09g24680 Pentatricopeptide repeat-containing protein At1g74600,... 0.05 OrthoFinder output from all 47 species
Len_g03900 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_472579g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Msp_g37643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17487 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43122 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06944 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53199 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.04 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54482 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56152 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g56707 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05231 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21792 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 233 280
IPR002885 Pentatricopeptide_repeat 308 327
IPR002885 Pentatricopeptide_repeat 408 433
IPR002885 Pentatricopeptide_repeat 200 230
IPR002885 Pentatricopeptide_repeat 334 381
No external refs found!