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  5. Ala_g02700

Ala_g02700


Description : Met-tRNA positioning component *(eIF5B) of initiator tRNA carrier complex & original description: none


Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02700
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G21160 No alias eukaryotic translation initiation factor 2 (eIF-2) family protein 0.05 OrthoFinder output from all 47 species
Adi_g012011 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.03 OrthoFinder output from all 47 species
Aev_g37468 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.05 OrthoFinder output from all 47 species
Als_g22498 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.07 OrthoFinder output from all 47 species
Aob_g07436 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.09 OrthoFinder output from all 47 species
Ceric.31G051600.1 Ceric.31G051600 Met-tRNA positioning component *(eIF5B) of initiator... 0.1 OrthoFinder output from all 47 species
Cre02.g078100 No alias Protein biosynthesis.translation initiation.eIF5B... 0.02 OrthoFinder output from all 47 species
Dcu_g03209 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.04 OrthoFinder output from all 47 species
Dde_g25106 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.07 OrthoFinder output from all 47 species
GSVIVT01034895001 No alias Protein biosynthesis.translation initiation.eIF5B... 0.03 OrthoFinder output from all 47 species
Lfl_g03512 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.07 OrthoFinder output from all 47 species
Mp4g09260.1 No alias Met-tRNA positioning component eIF5B of initiator tRNA... 0.05 OrthoFinder output from all 47 species
Ore_g16364 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g33223 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.04 OrthoFinder output from all 47 species
Sam_g25594 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.03 OrthoFinder output from all 47 species
Smo166557 No alias Protein biosynthesis.translation initiation.eIF5B... 0.03 OrthoFinder output from all 47 species
Solyc03g058350.4.1 Solyc03g058350 Met-tRNA positioning component eIF5B of initiator tRNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 962 1169
IPR023115 TIF_IF2_dom3 1286 1399
IPR004161 EFTu-like_2 1197 1272
No external refs found!