Ala_g03130

Description : component *(uL24c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0006569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006569_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g03130

Target	Alias	Description	ECC score	Gene Family Method
AT5G54600	No alias	Translation protein SH3-like family protein	0.02	OrthoFinder output from all 47 species
Als_g04734	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aop_g00183	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Aspi01Gene42449.t1	Aspi01Gene42449	component *(uL24c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ehy_g22263	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Len_g05147	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Lfl_g05272	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
MA_10018366g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Mp3g07850.1	No alias	component psRPL24 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Msp_g18519	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ore_g05626	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016787	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sam_g08486	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sam_g08487	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Solyc07g063960.3.1	Solyc07g063960	component psRPL24 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Spa_g00224	No alias	component *(uL24c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Zm00001e013043_P001	Zm00001e013043	component psRPL24 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0010242	oxygen evolving activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003256	Ribosomal_L24	112	175
IPR005824	KOW	79	110

External Links

No external refs found!

Ala_g03130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation