Ala_g03971 (CYCP4;1)

Aliases : CYCP4;1

Description : regulatory protein *(CYCP(CYCU) of cell cycle & original description: none

Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g03971
Cluster	HCCA: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
Adi_g019195	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Aev_g16557	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ala_g25698	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Ala_g36160	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g04798	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Als_g13537	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Als_g21897	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aop_g00597	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aop_g11744	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene51759.t1	CYCP4;1, Aspi01Gene51759	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Cba_g07393	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Cba_g12754	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ceric.10G034800.1	CYCP2;1, Ceric.10G034800	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Dac_g04053	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Dac_g21403	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Dac_g21404	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Dde_g07788	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ehy_g05568	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ehy_g06469	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ehy_g11009	CYCP4;2, CYCP4	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Gb_27223	CYCP3;2	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
Gb_27229	CYCP3;2	cyclin (CYCP)	0.05	OrthoFinder output from all 47 species
LOC_Os02g03294.1	CYCP4;1, LOC_Os02g03294	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
LOC_Os10g41430.1	CYCP4;1, LOC_Os10g41430	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
Len_g03235	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Lfl_g00807	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Lfl_g38253	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
MA_10289079g0010	cycp3;1	cyclin (CYCP)	0.04	OrthoFinder output from all 47 species
MA_57087g0010	cycp3;1	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
Msp_g00510	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Nbi_g13934	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ore_g22726	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Ore_g28947	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Pir_g09300	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Pnu_g10155	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ppi_g07325	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007745	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Sam_g05185	No alias	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Solyc03g093790.3.1	CYCP4;1, Solyc03g093790	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
Solyc09g065200.4.1	CYCP1;1, Solyc09g065200	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
Spa_g03908	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Spa_g16879	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Spa_g39740	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Spa_g47429	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Tin_g19076	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Tin_g27209	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Zm00001e007314_P001	cycp3;1, Zm00001e007314	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
Zm00001e007371_P002	CYCP4;3, Zm00001e007371	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	4	108

External Links

No external refs found!

Ala_g03971 (CYCP4;1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation