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  5. Lfl_g00411

Lfl_g00411


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g00411
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00028670 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00085p00099740 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00165p00044350 evm_27.TU.AmTr_v1... Universal stress protein PHOS32 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020685.52 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g12569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011877001 No alias Universal stress protein A-like protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os07g47620.1 LOC_Os07g47620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g17856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24168 RD2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g25399 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10303844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_93977g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g16930.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo177600 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g057000.3.1 Solyc01g057000 Universal stress protein A-like protein OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g066810.4.1 Solyc01g066810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g014600.3.1 Solyc04g014600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g14630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 39 191
No external refs found!