Description : component *(uL10c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0005040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g00434 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00023p00218670 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.08 | OrthoFinder output from all 47 species | |
| AT5G13510 | No alias | Ribosomal protein L10 family protein | 0.15 | OrthoFinder output from all 47 species | |
| Adi_g039494 | No alias | component *(uL10) of organelle large ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04789 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g52226 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g00810 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05054 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene48059.t1 | Aspi01Gene48059 | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27816 | No alias | component *(uL10) of organelle large ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G078900.1 | Ceric.20G078900 | component *(uL10c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Cre06.g272850 | No alias | Protein biosynthesis.organelle translation... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g03164 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g03520 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g19314 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g00714 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21730 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os03g17580.1 | LOC_Os03g17580 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Len_g13372 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| MA_483364g0010 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g07300.1 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.17 | OrthoFinder output from all 47 species | |
| Msp_g00974 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00675 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19831 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g30194 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32458 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11548 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_1330V3.1 | Pp3c1_1330 | Ribosomal protein L10 family protein | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008577 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Smo233811 | No alias | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc04g009540.1.1 | Solyc04g009540 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g24954 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g00512 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001284_P001 | Zm00001e001284 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038440_P001 | Zm00001e038440 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034311 | diol metabolic process | IEP | HCCA |
| BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001790 | Ribosomal_L10P | 66 | 149 |
| No external refs found! |
