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  5. Ala_g04742

Ala_g04742


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04742

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242080 CRR28,... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07498 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13994 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene19894.t1 Aspi01Gene19894 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66060.t1 Aspi01Gene66060 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000887 No alias not classified & original description: CDS=1-1611 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038857 No alias not classified & original description: CDS=1-2421 0.04 OrthoFinder output from all 47 species
Azfi_s0128.g048815 No alias not classified & original description: CDS=1-1722 0.04 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.03 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.04 OrthoFinder output from all 47 species
Cba_g13797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G069900.1 Ceric.06G069900 not classified & original description: pacid=50620408... 0.03 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.03 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04912 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33321 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25197 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32845 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g13259 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37426 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13996 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15172 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27953 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57540 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63391 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26686 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g04620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05183 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14956 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16300 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55588 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08628 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 172 218
IPR002885 Pentatricopeptide_repeat 273 320
IPR002885 Pentatricopeptide_repeat 69 116
IPR002885 Pentatricopeptide_repeat 375 421
IPR002885 Pentatricopeptide_repeat 478 525
IPR002885 Pentatricopeptide_repeat 146 169
IPR002885 Pentatricopeptide_repeat 554 580
No external refs found!