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  5. Ala_g04792

Ala_g04792 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04792

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00191640 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g20640 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12256 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46236 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000264_P001 OPCL1, Zm00001e000264 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 48 452
IPR025110 AMP-bd_C 461 536
No external refs found!