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  5. Ala_g05354

Ala_g05354 (ACA8, AT-ACA8)


Aliases : ACA8, AT-ACA8

Description : not classified & original description: none


Gene families : OG0000086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g05354
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene22842.t2 ATACA10, CIF1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28556.t1 ACA8, AT-ACA8,... P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021234.6 ACA11 Solute transport.primary active transport.P-type ATPase... 0.03 OrthoFinder output from all 47 species
Ehy_g31691 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.02 OrthoFinder output from all 47 species
LOC_Os12g04220.1 ACA11, LOC_Os12g04220 P2B-type calcium cation-transporting ATPase (ACA) 0.03 OrthoFinder output from all 47 species
Len_g29283 ACA11 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.08 OrthoFinder output from all 47 species
Len_g35823 ACA8, AT-ACA8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54148 ATACA10, CIF1, ACA10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54869 ACA8, AT-ACA8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12250 ACA11 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Ore_g19419 ACA11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02385 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019429 ACA4 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Sam_g34341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48524 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR004014 ATPase_P-typ_cation-transptr_N 89 155
No external refs found!