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  5. Ala_g06798

Ala_g06798


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g06798
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
AT1G14470 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G56690 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.03 OrthoFinder output from all 47 species
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18840 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g002881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003802 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075673 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g094457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g13651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g34629 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14256.t1 Aspi01Gene14256 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29991 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75118 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G059900.1 Ceric.07G059900 not classified & original description: pacid=50627027... 0.04 OrthoFinder output from all 47 species
Ceric.15G066400.1 Ceric.15G066400 not classified & original description: pacid=50640755... 0.04 OrthoFinder output from all 47 species
Ceric.16G050700.1 Ceric.16G050700 not classified & original description: pacid=50589143... 0.05 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z079200.1 CRR22, Ceric.1Z079200 not classified & original description: pacid=50582193... 0.04 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.03 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.04 OrthoFinder output from all 47 species
Ceric.23G060300.1 CRR22, Ceric.23G060300 not classified & original description: pacid=50610371... 0.03 OrthoFinder output from all 47 species
Ceric.31G069700.1 CRR21, Ceric.31G069700 not classified & original description: pacid=50574812... 0.05 OrthoFinder output from all 47 species
Ceric.32G042700.1 Ceric.32G042700 not classified & original description: pacid=50598057... 0.04 OrthoFinder output from all 47 species
Ceric.34G039000.1 Ceric.34G039000 not classified & original description: pacid=50623583... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000342.38 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.101 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g34941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35456 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40896 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36299 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50253 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.06 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.04 OrthoFinder output from all 47 species
GSVIVT01008757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.03 OrthoFinder output from all 47 species
GSVIVT01010654001 No alias Pentatricopeptide repeat-containing protein At4g38010... 0.04 OrthoFinder output from all 47 species
GSVIVT01015468001 No alias Pentatricopeptide repeat-containing protein At1g31430... 0.04 OrthoFinder output from all 47 species
GSVIVT01015521001 No alias Pentatricopeptide repeat-containing protein At4g32430,... 0.04 OrthoFinder output from all 47 species
GSVIVT01017075001 OTP82 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
GSVIVT01021774001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species
GSVIVT01022208001 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.06 OrthoFinder output from all 47 species
GSVIVT01024915001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.06 OrthoFinder output from all 47 species
GSVIVT01028819001 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.04 OrthoFinder output from all 47 species
GSVIVT01031849001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
GSVIVT01036010001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_08569 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os02g07050.1 LOC_Os02g07050 Pentatricopeptide repeat-containing protein At4g20770... 0.04 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
LOC_Os04g35650.1 LOC_Os04g35650 Pentatricopeptide repeat-containing protein At3g26540... 0.04 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.04 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06666 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Nbi_g20273 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37474 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38645 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008324 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species
Sam_g09072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27231 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo106861 OTP82 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc01g091610.1.1 Solyc01g091610 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
Solyc02g065560.1.1 Solyc02g065560 Pentatricopeptide repeat-containing protein At2g33680... 0.04 OrthoFinder output from all 47 species
Solyc03g115790.1.1 CRR28, Solyc03g115790 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.05 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
Solyc11g007230.1.1 Solyc11g007230 Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
Spa_g06501 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14145 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.04 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e021026_P001 Zm00001e021026 Pentatricopeptide repeat-containing protein At1g09190... 0.03 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 706 754
IPR002885 Pentatricopeptide_repeat 404 451
IPR002885 Pentatricopeptide_repeat 812 855
IPR002885 Pentatricopeptide_repeat 302 350
IPR002885 Pentatricopeptide_repeat 605 653
IPR002885 Pentatricopeptide_repeat 505 551
IPR002885 Pentatricopeptide_repeat 914 937
IPR002885 Pentatricopeptide_repeat 882 904
IPR002885 Pentatricopeptide_repeat 378 402
IPR032867 DYW_dom 1034 1102
No external refs found!