Ala_g07176


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07176

Target Alias Description ECC score Gene Family Method Actions
Adi_g005661 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020425 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11472 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16961 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16974 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19740 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g21415 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g22832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24374 MEF19 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g32451 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33723 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g35873 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g37258 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g37714 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06378 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g27894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67766 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000903 EMB2261 not classified & original description: CDS=1-2043 0.07 OrthoFinder output from all 47 species
Azfi_s0007.g010669 No alias not classified & original description: CDS=1-3072 0.06 OrthoFinder output from all 47 species
Azfi_s0021.g015645 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1737 0.06 OrthoFinder output from all 47 species
Azfi_s0059.g034591 No alias not classified & original description: CDS=1-1749 0.08 OrthoFinder output from all 47 species
Azfi_s0232.g059292 No alias not classified & original description: CDS=1-1740 0.06 OrthoFinder output from all 47 species
Azfi_s0410.g068507 No alias not classified & original description: CDS=1-2022 0.06 OrthoFinder output from all 47 species
Azfi_s0579.g078277 No alias not classified & original description: CDS=1-1956 0.05 OrthoFinder output from all 47 species
Ceric.05G054800.1 Ceric.05G054800 not classified & original description: pacid=50577632... 0.04 OrthoFinder output from all 47 species
Ceric.15G077000.1 EMB2261, Ceric.15G077000 not classified & original description: pacid=50639459... 0.03 OrthoFinder output from all 47 species
Ceric.26G072000.1 Ceric.26G072000 not classified & original description: pacid=50599752... 0.05 OrthoFinder output from all 47 species
Ceric.30G029200.1 Ceric.30G029200 not classified & original description: pacid=50608909... 0.04 OrthoFinder output from all 47 species
Ceric.36G017000.1 Ceric.36G017000 not classified & original description: pacid=50569086... 0.04 OrthoFinder output from all 47 species
Dac_g16108 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g37938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14779 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16787 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43169 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031733001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Len_g05167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54060 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g42117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01896 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g03324 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08832 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31968 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39647 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g53955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009200 OTP82 not classified & original description: CDS=343-1080 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009486 No alias not classified & original description: CDS=1-3465 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017584 No alias not classified & original description: CDS=1-3165 0.05 OrthoFinder output from all 47 species
Sam_g36326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo113567 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Solyc05g009400.3.1 Solyc05g009400 Pentatricopeptide repeat-containing protein At3g29230... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 345
IPR002885 Pentatricopeptide_repeat 400 448
IPR002885 Pentatricopeptide_repeat 502 547
IPR002885 Pentatricopeptide_repeat 188 234
IPR002885 Pentatricopeptide_repeat 579 604
IPR002885 Pentatricopeptide_repeat 264 286
No external refs found!