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  5. Ala_g07548

Ala_g07548 (LHCB3*1, LHCB3)


Aliases : LHCB3*1, LHCB3

Description : component *(LHCb1/2/3) of LHC-II complex & original description: none


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07548

Target Alias Description ECC score Gene Family Method Actions
Adi_g023263 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aob_g04833 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aob_g17843 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aob_g18768 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g18115 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g08707 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Cre03.g156900 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Cre12.g548400 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
LOC_Os07g37550.1 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
LOC_Os11g13890.1 LHCB5, LOC_Os11g13890 component LHCb5 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Nbi_g28982 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g36360 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g39616 LHCB2.2, LHCB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011045_P002 LHCB5, Zm00001e011045 component LHCb5 of LHC-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 60 227
No external refs found!