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  5. Ala_g07622

Ala_g07622 (ATVIIIA, VIIIA)


Aliases : ATVIIIA, VIIIA

Description : class VIII myosin microfilament-based motor protein & original description: none


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07622

Target Alias Description ECC score Gene Family Method Actions
AT1G04160 XI-8, XI-B, XIB, ATXIB myosin XI B 0.02 OrthoFinder output from all 47 species
AT4G28710 XIH, ATXIH Myosin family protein with Dil domain 0.03 OrthoFinder output from all 47 species
AT4G33200 XI-15, ATXI-I, XI-I myosin, putative 0.03 OrthoFinder output from all 47 species
AT5G20490 ATXIK, XI-17, XIK Myosin family protein with Dil domain 0.04 OrthoFinder output from all 47 species
AT5G43900 XI-6, ATMYA2, XI-2, MYA2 myosin 2 0.03 OrthoFinder output from all 47 species
Adi_g055863 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Adi_g117107 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Aev_g20785 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Aob_g14483 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Ceric.03G015200.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
LOC_Os02g57190.1 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g29350.1 ATXIE, XIE,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Lfl_g03510 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Lfl_g27695 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Msp_g13318 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.07 OrthoFinder output from all 47 species
Msp_g15308 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Ore_g16659 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Solyc06g008090.3.1 XI-6, ATMYA2,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e020540_P002 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 1186 1204
IPR000048 IQ_motif_EF-hand-BS 1114 1133
IPR001609 Myosin_head_motor_dom 439 1098
No external refs found!