Ala_g08117 (ATGH9A1, IRX2, KOR,...)

Aliases : ATGH9A1, IRX2, KOR, TSD1, RSW2, GH9A1, KOR1, DEC

Description : cellulose synthase endo-1,4-beta-glucanase *(KOR) & original description: none

Gene families : OG0001763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001763_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g08117
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
Pir_g38165	ATGH9A1, IRX2,...	cellulose synthase endo-1,4-beta-glucanase *(KOR) &...	0.03	OrthoFinder output from all 47 species
Zm00001e001547_P001	ATGH9A1, IRX2,...	KOR-type cellulose synthase endo-1,4-beta-glucanase	0.02	OrthoFinder output from all 47 species
Zm00001e012080_P004	ATGH9A1, IRX2,...	KOR-type cellulose synthase endo-1,4-beta-glucanase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001701	Glyco_hydro_9	106	574

External Links

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