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  5. Ala_g08457

Ala_g08457


Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08457
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00198340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G04360 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G37580 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G03550 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g03117 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g15196 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36586.t1 Aspi01Gene36586 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49237.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014251 ATL2, TL2 not classified & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Cba_g03715 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g43673 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G091300.1 Ceric.09G091300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G061400.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G062000.1 Ceric.22G062000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g26468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29562 ATL2, TL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04645 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_29602 BRH1 RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
Gb_30879 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.02 OrthoFinder output from all 47 species
Gb_33184 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_40644 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g37730.1 LOC_Os04g37730 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os04g50100.1 LOC_Os04g50100 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os06g06150.1 LOC_Os06g06150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g11450.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os07g06560.1 LOC_Os07g06560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os07g48680.1 LOC_Os07g48680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10426163g0010 RHA3B no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_111727g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_189618g0010 ATL8 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_227897g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_280399g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_31736g0010 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43543g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_68992g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp4g04600.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g02407 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g18327 ATL4H not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26608 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g17673 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g27082 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g12248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08896 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Solyc08g081370.1.1 BRH1, Solyc08g081370 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc09g010650.1.1 Solyc09g010650 RING-H2 finger protein ATL33 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g066510.3.1 Solyc11g066510 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc12g087840.1.1 Solyc12g087840 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g01259 BRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22755 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g16292 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g28275 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e015449_P001 Zm00001e015449 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015495_P001 Zm00001e015495 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023260_P001 Zm00001e023260 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 160
No external refs found!