Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g08515 | |
| Cluster | HCCA: Cluster_60 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g19927 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20825 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g17530.2 | LOC_Os11g17530 | Pentatricopeptide repeat-containing protein At2g37320... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g17636 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_475393g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14465 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g58117 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g46568 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14308 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g17827 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 742 | 768 |
| IPR002885 | Pentatricopeptide_repeat | 211 | 234 |
| IPR002885 | Pentatricopeptide_repeat | 714 | 739 |
| IPR002885 | Pentatricopeptide_repeat | 614 | 640 |
| IPR046848 | E_motif | 858 | 902 |
| IPR002885 | Pentatricopeptide_repeat | 336 | 383 |
| IPR002885 | Pentatricopeptide_repeat | 806 | 837 |
| IPR002885 | Pentatricopeptide_repeat | 238 | 282 |
| IPR002885 | Pentatricopeptide_repeat | 537 | 575 |
| IPR002885 | Pentatricopeptide_repeat | 437 | 484 |
| No external refs found! |
