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  5. Ala_g08842

Ala_g08842


Description : not classified & original description: none


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08842
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G12250 No alias Pentapeptide repeat-containing protein 0.05 OrthoFinder output from all 47 species
Als_g02920 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g04025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cre17.g721700 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g28816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07925 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001784 No alias not classified & original description: CDS=1-996 0.05 OrthoFinder output from all 47 species
Sam_g15961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Tin_g10553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 175 208
IPR001646 5peptide_repeat 108 147
No external refs found!