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  5. Ala_g09807

Ala_g09807 (emb1473)


Aliases : emb1473

Description : component *(uL13c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0006254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g09807
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00228230 emb1473,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT1G78630 emb1473 Ribosomal protein L13 family protein 0.07 OrthoFinder output from all 47 species
Adi_g087764 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aev_g00534 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g17613 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Aob_g06248 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g00301 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Aspi01Gene67483.t1 emb1473, Aspi01Gene67483 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0224.g058887 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ceric.14G072800.1 emb1473, Ceric.14G072800 component *(uL13c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020912.24 emb1473 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g264350 emb1473 Protein biosynthesis.organelle translation... 0.12 OrthoFinder output from all 47 species
Dac_g17592 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dcu_g00726 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dde_g01255 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ehy_g04479 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
GSVIVT01014101001 emb1473 Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Gb_28095 emb1473 component psRPL13 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
LOC_Os01g54540.1 emb1473, LOC_Os01g54540 component psRPL13 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Len_g01005 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Lfl_g03832 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_10433400g0010 emb1473 component psRPL13 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
MA_27171g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp3g07030.1 emb1473 component psRPL13 of large ribosomal subunit proteome 0.14 OrthoFinder output from all 47 species
Nbi_g04003 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ore_g11308 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pnu_g03358 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c24_18330V3.1 emb1473, Pp3c24_18330 Ribosomal protein L13 family protein 0.01 OrthoFinder output from all 47 species
Ppi_g11794 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sam_g16893 No alias component *(uL13c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Smo7665 emb1473 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc07g062190.4.1 emb1473, Solyc07g062190 component psRPL13 of large ribosomal subunit proteome 0.13 OrthoFinder output from all 47 species
Solyc12g014390.3.1 emb1473, Solyc12g014390 component psRPL13 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Spa_g21366 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Tin_g09876 emb1473 component *(uL13c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 95 213
No external refs found!