Description : U-Box-group-II E3 ubiquitin ligase & original description: none
Gene families : OG0004266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g10271 | |
| Cluster | HCCA: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00240140 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT3G47820 | PUB39 | PLANT U-BOX 39 | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04662 | PUB38, ATPUB38 | U-Box-group-II E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G047200.1 | PUB39, Ceric.29G047200 | U-Box-group-II E3 ubiquitin ligase & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40033 | PUB38, ATPUB38 | U-Box-group-II E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03795 | PUB39 | U-Box-group-II E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g16204 | PUB39 | U-Box-group-II E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13006 | PUB38, ATPUB38 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16859 | PUB38, ATPUB38 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g13080.1 | PUB39, LOC_Os06g13080 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g13090.1 | PUB39, LOC_Os06g13090 | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| MA_252170g0010 | PUB38, ATPUB38 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15300 | No alias | U-Box-group-II E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo90666 | PUB39 | U-box domain-containing protein 38 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15402 | PUB38, ATPUB38 | U-Box-group-II E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| No external refs found! |
