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  5. Ala_g10482

Ala_g10482 (RPT1A)


Aliases : RPT1A

Description : regulatory component *(RPT1) of 26S proteasome & original description: none


Gene families : OG0004346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g10482

Target Alias Description ECC score Gene Family Method Actions
Cba_g78469 RPT1A regulatory component *(RPT1) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cre14.g625400 RPT1A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os06g09290.2 RPT1A, LOC_Os06g09290 regulatory component RPT1 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Lfl_g06929 RPT1A regulatory component *(RPT1) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 204 336
IPR041569 AAA_lid_3 359 403
No external refs found!