Ala_g11130 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11130

Target Alias Description ECC score Gene Family Method Actions
Aev_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33295.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G016100.1 LOP1, TRN1,... not classified & original description: pacid=50621243... 0.03 OrthoFinder output from all 47 species
Dac_g08979 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21708 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39298 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g52046 LOP1, TRN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g40178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g08770.1 No alias Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g28516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06746 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42088 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25087 LOP1, TRN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!