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  5. Ala_g11900

Ala_g11900


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.03 OrthoFinder output from all 47 species
Ala_g20020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24161.t1 Aspi01Gene24161 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27928.t1 Aspi01Gene27928 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40222.t1 Aspi01Gene40222 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54158.t1 Aspi01Gene54158 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0090.g042762 No alias not classified & original description: CDS=1-1059 0.03 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011625 No alias not classified & original description: CDS=1-1443 0.03 OrthoFinder output from all 47 species
Sam_g10594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g009000.1.1 Solyc12g009000 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 257 423
No external refs found!