Ala_g11944 (WRKY42, AtWRKY42)

Aliases : WRKY42, AtWRKY42

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g11944

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00103880	WRKY55,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G29860	ATWRKY71, WRKY71	WRKY DNA-binding protein 71	0.05	OrthoFinder output from all 47 species
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.02	OrthoFinder output from all 47 species
Adi_g114020	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g13886	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g15724	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g29621	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01011356001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01024624001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01032662001	WRKY55, ATWRKY55	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01034769001	No alias	No description available	0.02	OrthoFinder output from all 47 species
LOC_Os06g05380.1	WRKY72,...	transcription factor (WRKY)	0.1	OrthoFinder output from all 47 species
MA_10434651g0010	WRKY4	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
MA_212937g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_52928g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
MA_74833g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
MA_88437g0010	WRKY6, ATWRKY6	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_892467g0010	WRKY72, ATWRKY72	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp5g05560.1	WRKY6, ATWRKY6	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Ppi_g08423	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g38673	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16109	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g06081	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g10526	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e019977_P001	ATWRKY51,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Zm00001e027301_P001	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	384	441

External Links

No external refs found!

Ala_g11944 (WRKY42, AtWRKY42)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation