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  5. Ala_g12175

Ala_g12175 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : starch synthase *(SS4) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00164200 ATSS3, SS3,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cba_g18815 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g663850 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02313 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0222.g026242 ATSS3, SS3 starch synthase *(SS3) & original description: CDS=271-2166 0.03 OrthoFinder output from all 47 species
Sam_g12029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071040.3.1 ATSS4, SS4,... starch synthase (SSIV) 0.06 OrthoFinder output from all 47 species
Zm00001e027473_P001 ATSS4, SS4,... starch synthase (SSIV) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 846 1002
IPR013534 Starch_synth_cat_dom 551 790
No external refs found!