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  5. Ala_g12426

Ala_g12426


Description : MYB-RELATED transcription factor *(MYB-R-R) & original description: none


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12426

Target Alias Description ECC score Gene Family Method Actions
AT1G70000 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61620 No alias myb-like transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g021554 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g39083 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Als_g57625 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Aob_g01227 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Aop_g13795 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aop_g28303 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048880 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Dac_g13852 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08181 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_28483 No alias transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
LOC_Os01g04930.1 LOC_Os01g04930 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os01g41900.1 LOC_Os01g41900 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os05g37060.1 LOC_Os05g37060 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
LOC_Os08g04840.1 LOC_Os08g04840 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41260.1 LOC_Os10g41260 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Len_g31113 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
MA_11322g0010 No alias transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
MA_40234g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_79012g0010 No alias transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Ore_g15657 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ore_g21324 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ore_g29667 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g09334 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g09582 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02805 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g13729 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Sam_g33819 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Smo133546 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Smo439294 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc03g096350.3.1 Solyc03g096350 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Solyc12g008800.3.1 Solyc12g008800 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Spa_g22882 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Spa_g57220 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Tin_g06457 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Tin_g06825 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e025946_P002 Zm00001e025946 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Zm00001e028729_P001 Zm00001e028729 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e031738_P001 Zm00001e031738 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e031755_P001 Zm00001e031755 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 84 129
No external refs found!