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  5. Ala_g13178

Ala_g13178 (GATA12)


Aliases : GATA12

Description : transcription factor *(A/B-GATA) & original description: none


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00136770 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT3G54810 BME3-ZF, BME3, GATA8 Plant-specific GATA-type zinc finger transcription... 0.03 OrthoFinder output from all 47 species
AT3G60530 GATA4 GATA transcription factor 4 0.02 OrthoFinder output from all 47 species
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g036776 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043911 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058312 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059846 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088429 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16772 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20978 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52135 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07249.t1 GATA9, Aspi01Gene07249 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12734.t1 GATA5, Aspi01Gene12734 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30025.t1 GATA5, Aspi01Gene30025 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64140.t1 GATA4, Aspi01Gene64140 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69371.t1 GATA12, Aspi01Gene69371 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G120400.1 GATA22, CGA1,... transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.02G072900.1 GATA17, Ceric.02G072900 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g00642 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11115 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06867 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08339 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21727 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017011001 GATA12 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01033385001 GATA9 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Gb_24250 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43150.1 GATA5, LOC_Os02g43150 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45650.2 GATA5, LOC_Os04g45650 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os09g08150.1 LOC_Os09g08150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g40810.1 GATA2, LOC_Os10g40810 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Len_g07829 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08386 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12686 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26280 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_44185g0010 GATA4 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Nbi_g02094 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g34157 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09526 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15675 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25101 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37168 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09627 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003575 GATA15 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011193 GATA2 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015681 GATA12 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909 GATA9 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g07644 No alias transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g084590.4.1 GATA5, Solyc02g084590 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Solyc02g085190.2.1 HAN, MNP,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc03g033660.4.1 GATA5, Solyc03g033660 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc04g015360.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Solyc05g056120.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Spa_g16103 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22264 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09676 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33693 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007391_P002 GATA5, Zm00001e007391 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e041332_P001 GATA5, Zm00001e041332 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 305 339
No external refs found!