Ala_g14047

Description : subunit gamma *(CCT3) of CCT chaperonin folding complex & original description: none

Gene families : OG0005075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005075_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g14047

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00176500	evm_27.TU.AmTr_v1...	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
AT5G26360	No alias	TCP-1/cpn60 chaperonin family protein	0.03	OrthoFinder output from all 47 species
Adi_g087113	No alias	subunit gamma *(CCT3) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Cre10.g443250	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
Dac_g00874	No alias	subunit gamma *(CCT3) of CCT chaperonin folding complex...	0.04	OrthoFinder output from all 47 species
GSVIVT01000266001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	OrthoFinder output from all 47 species
GSVIVT01007770001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	OrthoFinder output from all 47 species
LOC_Os06g34690.1	LOC_Os06g34690	CCT3 subunit gamma of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
MA_37504g0010	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Mp7g14360.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Solyc05g056310.3.1	Solyc05g056310	CCT3 subunit gamma of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
Spa_g00971	No alias	subunit gamma *(CCT3) of CCT chaperonin folding complex...	0.05	OrthoFinder output from all 47 species
Tin_g01973	No alias	subunit gamma *(CCT3) of CCT chaperonin folding complex...	0.03	OrthoFinder output from all 47 species
Zm00001e000822_P001	Zm00001e000822	CCT3 subunit gamma of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
Zm00001e024916_P001	Zm00001e024916	CCT3 subunit gamma of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	31	524

External Links

No external refs found!

Ala_g14047

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation