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  5. Lfl_g01413

Lfl_g01413


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01413
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.03 OrthoFinder output from all 47 species
AT4G09120 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G30400 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g01042 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g23659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12685 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene61901.t1 Aspi01Gene61901 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0056.g034025 No alias not classified & original description: CDS=511-789 0.03 OrthoFinder output from all 47 species
Ceric.22G061800.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001155.20 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g07105 BRH1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g37469 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_00508 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os01g60730.2 LOC_Os01g60730 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g45390.1 LOC_Os02g45390 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os04g37730.1 LOC_Os04g37730 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os07g48680.1 LOC_Os07g48680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37760.1 ATL6, LOC_Os08g37760 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_280399g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_50561g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_78643g0010 No alias RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Pir_g46507 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03072 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g47545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo59303 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc05g008640.1.1 RHA2A, Solyc05g008640 RHA2 signal transducer of abscisic acid perception 0.05 OrthoFinder output from all 47 species
Spa_g29314 BRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e031439_P001 Zm00001e031439 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 96 139
No external refs found!