Description : methylation reader *(MBD5-6) & original description: none
Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g14271 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene44531.t1 | ATMBD6, MBD6,... | methylation reader *(MBD5-6) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene62285.t1 | ATMBD6, MBD6,... | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04582 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g61579 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G068700.1 | MBD05, MBD5,... | methylation reader *(MBD5-6) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g09137 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06705 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024953001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40293 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g01187 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g07671 | No alias | methylation reader *(MBD5-6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16545 | No alias | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35269 | No alias | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04676 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001739 | Methyl_CpG_DNA-bd | 345 | 395 |
| No external refs found! |
