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  5. Ala_g15556

Ala_g15556


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g15556
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 OrthoFinder output from all 47 species
AT2G17450 RHA3A RING-H2 finger A3A 0.03 OrthoFinder output from all 47 species
AT3G43430 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G61550 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G62690 ATL5 AtL5 0.02 OrthoFinder output from all 47 species
AT4G30400 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G05280 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g048849 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g060420 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g117766 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g09630 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12633 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g40193 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01755 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g11862 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g13275 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g15339 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g68751 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63217.t1 Aspi01Gene63217 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene70935.t1 ATL6, Aspi01Gene70935 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g37234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g49099 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.03 OrthoFinder output from all 47 species
Ceric.02G105300.1 ATL8, Ceric.02G105300 not classified & original description: pacid=50585310... 0.03 OrthoFinder output from all 47 species
Ceric.09G083500.1 Ceric.09G083500 not classified & original description: pacid=50586830... 0.04 OrthoFinder output from all 47 species
Ceric.10G020700.1 RHA2A, Ceric.10G020700 not classified & original description: pacid=50612578... 0.04 OrthoFinder output from all 47 species
Ceric.18G057400.1 RHA3A, Ceric.18G057400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.25G065700.1 Ceric.25G065700 not classified & original description: pacid=50593844... 0.05 OrthoFinder output from all 47 species
Ceric.34G056700.1 Ceric.34G056700 not classified & original description: pacid=50623881... 0.03 OrthoFinder output from all 47 species
Ceric.38G066400.1 Ceric.38G066400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g03534 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14977 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g34610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03720 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g09730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19870 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g22611 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g26675 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g28710 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_14777 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_40635 RHA2A RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
LOC_Os01g11520.1 LOC_Os01g11520 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g53500.1 LOC_Os01g53500 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g55110.1 LOC_Os01g55110 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os04g49160.1 LOC_Os04g49160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g45060.1 LOC_Os05g45060 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g17168 ATRING1, RING1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g27559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39367 RHA3B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_130176g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_152102g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15246g0010 BRH1 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_201391g0010 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.02 OrthoFinder output from all 47 species
MA_38494g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_46635g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_932090g0010 ATL6 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp8g15250.1 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Msp_g01017 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g11890 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g28489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g14314 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g02997 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20219 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g30102 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Pir_g46507 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66716 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g32058 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000797 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004696 ATRING1, RING1 not classified & original description: CDS=1-576 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012209 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013072 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Solyc01g081040.4.1 Solyc01g081040 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc01g095820.2.1 Solyc01g095820 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc01g109200.4.1 Solyc01g109200 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc02g082420.3.1 Solyc02g082420 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc06g150136.1.1 Solyc06g150136 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc08g076830.1.1 Solyc08g076830 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g02165 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g07427 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g09927 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g24936 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g29391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38079 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g53569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007103_P001 Zm00001e007103 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015449_P001 Zm00001e015449 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015495_P001 Zm00001e015495 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e022175_P001 Zm00001e022175 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030136_P001 Zm00001e030136 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e034829_P001 RHA3A, Zm00001e034829 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 125 169
No external refs found!