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  5. Ala_g15623

Ala_g15623 (VFB4, SKIP2)


Aliases : VFB4, SKIP2

Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g15623

Target Alias Description ECC score Gene Family Method Actions
Adi_g011567 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g17639 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.19G012600.1 VFB3, Ceric.19G012600 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dcu_g18630 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Nbi_g05363 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc02g092990.1.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Solyc03g044220.1.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 194 217
IPR041567 COI1_F-box 108 145
No external refs found!