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  5. Ala_g16211

Ala_g16211 (HB51, ATHB51, LMI1)


Aliases : HB51, ATHB51, LMI1

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g16211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267430 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Adi_g016627 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g111379 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G007200.1 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23915 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011377001 ATHB3, HB-3, ATHB-3, HAT7 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08960.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os09g29460.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_12866g0010 ATHB21, HB21, HB-2 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_441783g0010 AtHB23, HB23 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g02320.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Msp_g05256 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g39897 No alias HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g067410.2.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Spa_g02959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000532_P002 ATHB13, Zm00001e000532 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Zm00001e010637_P001 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 82 134
No external refs found!