Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00035580 | No alias | Pentatricopeptide repeat-containing protein At5g44230... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00062930 | EMB2261,... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00439p00011030 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G16480 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G74600 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G11460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G40405 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G59600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004435 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g067784 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19242 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30788 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g20865 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28416 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g67894 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene11731.t1 | Aspi01Gene11731 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042642 | No alias | not classified & original description: CDS=39-695 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0117.g046573 | No alias | not classified & original description: CDS=1-1419 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.25G042100.1 | Ceric.25G042100 | not classified & original description: pacid=50593153... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.28G051100.1 | Ceric.28G051100 | not classified & original description: pacid=50570532... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.39G046500.1 | Ceric.39G046500 | not classified & original description: pacid=50582543... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001657.6 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g29737 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g24017 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010898001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01025574001 | No alias | Pentatricopeptide repeat-containing protein At2g37320... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16062 | OTP84 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g34720.1 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08934 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09617 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18998 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30110 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10317671g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436932g0010 | No alias | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.04 | OrthoFinder output from all 47 species | |
| MA_474261g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g06724 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g11803 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g32625 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g38771 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g02848 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0005.g002726 | No alias | not classified & original description: CDS=1-1413 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0053.g014176 | No alias | not classified & original description: CDS=1-2259 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0124.g021590 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2022 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16066 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo108652 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Smo111891 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo399 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
| Smo56766 | No alias | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| Smo98955 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g066080.1.1 | OTP85, Solyc06g066080 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12101 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g02687 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04706 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17476 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g21792 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g28890 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g45955 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001038_P001 | CRR2, Zm00001e001038 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019482_P001 | Zm00001e019482 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031660_P001 | Zm00001e031660 | Pentatricopeptide repeat-containing protein At4g14170... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040920_P001 | Zm00001e040920 | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| MF | GO:0009029 | tetraacyldisaccharide 4'-kinase activity | IEP | HCCA |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | HCCA |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
| BP | GO:0046493 | lipid A metabolic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | HCCA |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 11 | 38 |
| No external refs found! |
