Ala_g16587


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g16587

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Adi_g004480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g033736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050393 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059237 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12178 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21860 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g22600 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23929 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g37786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21963.t1 Aspi01Gene21963 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009229 No alias not classified & original description: CDS=1-2601 0.04 OrthoFinder output from all 47 species
Azfi_s0019.g015081 No alias not classified & original description: CDS=1-2091 0.05 OrthoFinder output from all 47 species
Azfi_s0471.g072918 No alias not classified & original description: CDS=1-3447 0.03 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45697 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.04 OrthoFinder output from all 47 species
Ceric.04G079600.1 OTP84, Ceric.04G079600 not classified & original description: pacid=50631214... 0.03 OrthoFinder output from all 47 species
Ceric.1Z005100.1 Ceric.1Z005100 not classified & original description: pacid=50567700... 0.03 OrthoFinder output from all 47 species
Ceric.1Z081600.1 CRR22, Ceric.1Z081600 not classified & original description: pacid=50582216... 0.04 OrthoFinder output from all 47 species
Ceric.21G046200.1 Ceric.21G046200 not classified & original description: pacid=50604280... 0.05 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.03 OrthoFinder output from all 47 species
Ceric.28G068900.1 Ceric.28G068900 not classified & original description: pacid=50570286... 0.06 OrthoFinder output from all 47 species
Ceric.36G060000.1 Ceric.36G060000 not classified & original description: pacid=50568455... 0.04 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.04 OrthoFinder output from all 47 species
Ceric.39G007300.1 Ceric.39G007300 not classified & original description: pacid=50582343... 0.07 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21668 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50253 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008922001 No alias Pentatricopeptide repeat-containing protein At4g08210... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11470.1 LOC_Os01g11470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g04337 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04340 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18041 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18998 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07562 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13259 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19402 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27766 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g28174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_370961g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Msp_g18730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16061 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16586 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66342 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53705 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g42477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo26993 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Spa_g08793 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45053 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06420 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11066 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25647 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26639 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26902 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32370 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g34661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 146 173
IPR002885 Pentatricopeptide_repeat 113 143
IPR002885 Pentatricopeptide_repeat 213 238
IPR002885 Pentatricopeptide_repeat 545 574
IPR002885 Pentatricopeptide_repeat 516 537
IPR002885 Pentatricopeptide_repeat 85 112
IPR002885 Pentatricopeptide_repeat 340 386
IPR002885 Pentatricopeptide_repeat 440 489
IPR002885 Pentatricopeptide_repeat 239 285
No external refs found!