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  5. Ala_g16809

Ala_g16809 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g16809

Target Alias Description ECC score Gene Family Method Actions
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002365 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g033090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g064866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.08 OrthoFinder output from all 47 species
Dac_g30262 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g07729 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28511 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo92426 EMB2758 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 325
IPR002885 Pentatricopeptide_repeat 381 428
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 152 176
IPR002885 Pentatricopeptide_repeat 457 479
IPR002885 Pentatricopeptide_repeat 253 272
No external refs found!