Ala_g16813 (CTF2B)

Aliases : CTF2B

Description : not classified & original description: none

Gene families : OG0000601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000601_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g16813

Target	Alias	Description	ECC score	Gene Family Method
AT5G05320	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.02	OrthoFinder output from all 47 species
Aspi01Gene54119.t1	CTF2A, Aspi01Gene54119	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene68213.t1	CTF2A, Aspi01Gene68213	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01026627001	No alias	Monooxygenase 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os03g05910.1	LOC_Os03g05910	Monooxygenase 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Lfl_g17561	CTF2A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g41217	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	None	Extended
MF	GO:0071949	FAD binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0010274	hydrotropism	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002938	FAD-bd	102	420

External Links

No external refs found!