Ala_g17197


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g17197

Target Alias Description ECC score Gene Family Method Actions
AT1G14470 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11472 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17592 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21042 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22832 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g23930 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24696 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36225 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g37258 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g26698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08600.t1 Aspi01Gene08600 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.05 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.05 OrthoFinder output from all 47 species
Dac_g26939 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g30448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
Len_g04830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08191 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18520 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g33650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43460 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57327 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63507 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002368 No alias not classified & original description: CDS=1-543 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018468 No alias solute transporter *(MTCC) & original description: CDS=2675-4273 0.02 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo70138 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07561 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 89 120
IPR002885 Pentatricopeptide_repeat 21 68
No external refs found!