1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g01742

Lfl_g01742 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01742

Target Alias Description ECC score Gene Family Method Actions
Aob_g08399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34196.t1 OPCL1, Aspi01Gene34196 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_13602 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.05 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g08577 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39436 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12256 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015443 No alias not classified & original description: CDS=406-2094 0.02 OrthoFinder output from all 47 species
Sam_g29127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g076300.3.1 Solyc08g076300 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g28398 AT4CL2, 4CL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 45 465
IPR025110 AMP-bd_C 474 549
No external refs found!