Ala_g17536


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g17536

Target Alias Description ECC score Gene Family Method Actions
Ala_g16531 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07390 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene34532.t1 Aspi01Gene34532 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64067.t1 MEF19, Aspi01Gene64067 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78232 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.19G003900.1 Ceric.19G003900 not classified & original description: pacid=50575192... 0.02 OrthoFinder output from all 47 species
Ceric.31G069700.1 CRR21, Ceric.31G069700 not classified & original description: pacid=50574812... 0.05 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.02 OrthoFinder output from all 47 species
Dac_g13535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46551 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39535 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01159 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20334 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38648 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54414 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015139 No alias not classified & original description: CDS=1-852 0.05 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo171135 OTP84 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Smo182822 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Tin_g06393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 144
IPR002885 Pentatricopeptide_repeat 17 46
IPR002885 Pentatricopeptide_repeat 48 95
No external refs found!