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  5. Lfl_g01847

Lfl_g01847


Description : subunit zeta *(CCT6) of CCT chaperonin folding complex & original description: none


Gene families : OG0003995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01847

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00116290 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00016450 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AT3G02530 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Ala_g11744 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Als_g01766 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Aop_g03812 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Ceric.16G067100.1 Ceric.16G067100 subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Cre09.g397200 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Dcu_g14364 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01031067001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Gb_18443 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g05470.1 LOC_Os05g05470 CCT6 subunit zeta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Len_g12186 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
MA_8438g0020 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Ore_g33910 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Pp3c11_26000V3.1 Pp3c11_26000 TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Smo158120 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Solyc02g063090.3.1 Solyc02g063090 CCT6 subunit zeta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Spa_g18569 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e010996_P001 Zm00001e010996 CCT6 subunit zeta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 29 528
No external refs found!