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  5. Ala_g18510

Ala_g18510 (ATTCP24, TCP24)


Aliases : ATTCP24, TCP24

Description : TCP-type transcription factor & original description: none


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18510
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.05 OrthoFinder output from all 47 species
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.01 OrthoFinder output from all 47 species
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.03 OrthoFinder output from all 47 species
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.02 OrthoFinder output from all 47 species
Adi_g060601 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g07745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40074 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07553 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G003200.1 TCP3, Ceric.01G003200 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.05 OrthoFinder output from all 47 species
Gb_07891 ATTCP24, TCP24 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Gb_17863 TCP3 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55750.1 TCP5, LOC_Os01g55750 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Lfl_g07001 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_101752g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_101752g0020 ATTCP24, TCP24 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_35349g0010 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_52440g0010 TCP4, MEE35 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_75780g0010 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_78665g0010 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Mp1g19590.1 TCP3 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Nbi_g10533 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41668 TCP4, MEE35 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_26670V3.1 TCP3, Pp3c11_26670 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.01 OrthoFinder output from all 47 species
Solyc02g077250.2.1 TCP4, MEE35,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Solyc06g069240.2.1 TCP12, BRC2,... transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Solyc06g069460.3.1 TCP5, Solyc06g069460 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc10g008780.1.1 TCP10, Solyc10g008780 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e019734_P001 TCP5, Zm00001e019734 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e034097_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 81 169
No external refs found!