Ala_g20264

Description : platform ATPase CDC48 & original description: none

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g20264

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00198390	CIP111,...	Calmodulin-interacting protein 111 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00072p00117380	evm_27.TU.AmTr_v1...	Cell division control protein 48 homolog D...	0.03	OrthoFinder output from all 47 species
AMTR_s00085p00052820	CDC48A, CDC48,...	Cell division cycle protein 48 homolog OS=Glycine max	0.02	OrthoFinder output from all 47 species
AT3G56690	CIP111	Cam interacting protein 111	0.02	OrthoFinder output from all 47 species
Adi_g114666	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g02580	CDC48B	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000525.10	emb1354, CDC48C	Cell division control protein 48 homolog C...	0.02	OrthoFinder output from all 47 species
Dcu_g08248	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g10601	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01007689001	No alias	Cell division cycle protein 48 homolog OS=Glycine max	0.03	OrthoFinder output from all 47 species
GSVIVT01025723001	No alias	Cell division control protein 48 homolog D...	0.05	OrthoFinder output from all 47 species
GSVIVT01025783001	CIP111	Calmodulin-interacting protein 111 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Lfl_g39791	No alias	platform ATPase CDC48 & original description: none	0.06	OrthoFinder output from all 47 species
MA_10429450g0010	No alias	Cell division control protein 48 homolog D...	0.04	OrthoFinder output from all 47 species
Msp_g06020	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g03860	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19173	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g16719	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021123	CIP111	not classified & original description: CDS=115-3081	0.02	OrthoFinder output from all 47 species
Sam_g13901	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g084050.2.1	Solyc10g084050	platform ATPase (CDC48)	0.02	OrthoFinder output from all 47 species
Zm00001e035514_P002	emb1354, CDC48C,...	Cell division control protein 48 homolog C...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	249	378
IPR003959	ATPase_AAA_core	522	655
IPR003338	CDC4_N-term_subdom	34	115
IPR015415	Vps4_C	728	768
IPR004201	Cdc48_dom2	136	198
IPR041569	AAA_lid_3	677	718
IPR041569	AAA_lid_3	401	442

External Links

No external refs found!

Ala_g20264

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation