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  4. Sequence
  5. Ala_g20675

Ala_g20675


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20675
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT1G16750 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
AT1G43020 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT3G12540 No alias Protein of unknown function, DUF547 0.05 OrthoFinder output from all 47 species
Adi_g060877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13551 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08714 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g38369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G014100.1 Ceric.20G014100 not classified & original description: pacid=50566742... 0.05 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000442 No alias not classified & original description: CDS=698-2671 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001935 No alias not classified & original description: CDS=1-2133 0.02 OrthoFinder output from all 47 species
Sam_g35283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g008560.2.1 Solyc06g008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e000910_P003 Zm00001e000910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e005808_P001 Zm00001e005808 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 116 149
IPR006869 DUF547 401 535
No external refs found!